Fioretti, Francesca (2011) Modelling the movement of transformed cell populations. [Tesi di dottorato] (Inedito)
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Tipologia del documento: | Tesi di dottorato |
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Lingua: | English |
Titolo: | Modelling the movement of transformed cell populations. |
Autori: | Autore Email Fioretti, Francesca francesca.fioretti@unina.it |
Data: | 30 Novembre 2011 |
Numero di pagine: | 81 |
Istituzione: | Università degli Studi di Napoli Federico II |
Dipartimento: | Biologia e patologia cellullare e molecolare "L. Califano" |
Scuola di dottorato: | Biotecnologie |
Dottorato: | Biologia computazionale e bioinformatica |
Ciclo di dottorato: | 24 |
Coordinatore del Corso di dottorato: | nome email Cocozza, Sergio sergio.cocozza@unina.it |
Tutor: | nome email Paolella, Giovanni paolella@dbbm.unina.it |
Data: | 30 Novembre 2011 |
Numero di pagine: | 81 |
Parole chiave: | Cell migration,random walk model,diffusion |
Settori scientifico-disciplinari del MIUR: | Area 05 - Scienze biologiche > BIO/10 - Biochimica |
Depositato il: | 06 Dic 2011 14:56 |
Ultima modifica: | 30 Apr 2014 19:47 |
URI: | http://www.fedoa.unina.it/id/eprint/8570 |
DOI: | 10.6092/UNINA/FEDOA/8570 |
Abstract
The aim of this work was to analyze migrating cell populations, in search of motion models able to accurately describe the features of normal and transformed fibroblast movement, under different experimental conditions. Diverse diffusive models were evaluated, by fitting them to experimental datasets obtained by collecting quantitative data on cell direction and step length under standard culture condition as well as after introduction of a wound in the cell layer. The analysis showed that fibroblast movement has the features of a superdiffusion in all the examined cases, as the squared displacements scale superlinearly with time. The persistent random walk model fits all data from fibroblast populations, although a varying degree of persistence was found under different experimental conditions. For NIH3T3 fibroblasts, high persistence was always observed, while NIHRas fibroblasts showed lower persistence in non wound stimulated cultures compared to stimulated ones. In presence of a wound stimulus, directional analysis allowed to associate persistence with a marked ability of fibroblasts to move, all together, towards a specific direction defined by the wound stimulus. Another superdiffusive model, the Lévy walk, was not successful in describing NIH3T3 and NIHRas fibroblast populations. The procedures have been made available within MotoCell, a web application previously developed to quantitatively study cell movement, in an effort to generate an effective tool, that can easily perform all the steps of a cell motility study, ranging from cell tracking, to descriptive statistics and model fit analysis.
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