Giliberti, Renato (2022) Oral plaque microbiome resilience under external dietary stimuli. [Tesi di dottorato]

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Tipologia del documento: Tesi di dottorato
Lingua: English
Titolo: Oral plaque microbiome resilience under external dietary stimuli
Autori:
Autore
Email
Giliberti, Renato
renato.gilberti@unina.it
Data: 12 Dicembre 2022
Numero di pagine: 143
Istituzione: Università degli Studi di Napoli Federico II
Dipartimento: Agraria
Dottorato: Food Science
Ciclo di dottorato: 34
Coordinatore del Corso di dottorato:
nome
email
Barone, Amalia
ambarone@unina.it
Tutor:
nome
email
Pasolli, Edoardo
[non definito]
Bolzan, Mattia
[non definito]
Georg, Zeller
[non definito]
Data: 12 Dicembre 2022
Numero di pagine: 143
Parole chiave: food science; oral microbiome; metagenomics; diet; peri-implantitis; oral diseases
Settori scientifico-disciplinari del MIUR: Area 07 - Scienze agrarie e veterinarie > AGR/15 - Scienze e tecnologie alimentari
Area 01 - Scienze matematiche e informatiche > INF/01 - Informatica
Area 01 - Scienze matematiche e informatiche > MAT/06 - Probabilità e statistica matematica
Depositato il: 19 Gen 2023 14:08
Ultima modifica: 28 Feb 2024 11:11
URI: http://www.fedoa.unina.it/id/eprint/14355

Abstract

Current knowledge allows us to predict host phenotype based on the microbiome composition. Last studies have demonstrated how we can predict disease state starting from oral microbiome composition. Oral microbiome characterization has been made mainly using 16S sequencing techniques. Dietary habits influence on oral microbiome composition has been defined marginally and with obsolete techniques. The objective of this research project is to fulfil the lack in terms of dietary habits influence on oral microbiome using the latest sequencing technologies and using statistical, computational and machine learning approaches. The study was conducted on a cohort composed of 451 subjects with dental implants. Results showed that Random forest algorithm is the classifier able to maximize classification performances. We show weak correlations between dietary habits and implant disease state while multiple correlations between dietary habits and microbial species results as statistical significant more specifically between carbohydrates sources and some potentially pathogenic species. The extension of the analysis to metabolic potential allow us to identify the correlations between carbohydrates and fat sources consumption and different metabolic pathways involved in different pathogenic processes.

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